STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_00038Uncharacterized protein. (734 aa)    
Predicted Functional Partners:
PSACC_00829
50S ribosomal protein L27.
  
 
 0.989
PSACC_02620
Ribosomal_L16 domain-containing protein.
  
 
 0.988
PSACC_01634
Uncharacterized protein.
  
 
 0.988
PSACC_00140
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.988
PSACC_00087
KH type-2 domain-containing protein.
  
 
 0.988
PSACC_03265
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.987
PSACC_01484
Uncharacterized protein.
  
   0.987
PSACC_01167
40S ribosomal protein S15a-4; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.987
PSACC_00264
Ribosomal_S10 domain-containing protein.
  
   0.987
PSACC_00034
KOW-like protein.
  
 
 0.987
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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