STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM30493.1Protein DVU_0532. (225 aa)    
Predicted Functional Partners:
SLM30494.1
Protein DVU_0531.
 
 0.939
SLM30495.1
UspA domain protein.
 
     0.849
SLM32711.1
Putative 4Fe-4S ferredoxin, iron-sulphur binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.847
hmcA
High-molecular-weight cytochrome c.
 
     0.832
SLM30491.1
Protein DVU_0534.
 
  
 0.815
SLM30497.1
Multi-sensor signal transduction histidine kinase.
 
 
  0.799
oxlT
Major facilitator superfamily, general substrate transporter, oxalate/formate transporter; Function of strongly homologous gene; transporter.
  
 
 0.790
SLM32709.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.768
SLM32712.1
Putative Acidic cytochrome c3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
     0.744
SLM30490.1
Protein DVU_0535.
 
  
 0.715
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.