STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsEGeneral secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (591 aa)    
Predicted Functional Partners:
pilC
PilC.
 
 0.953
SLM30380.1
Putative General secretion pathway protein F; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.953
SLM30649.1
Putative Type 4 fimbrial assembly protein pilC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.953
gspF
GspF1.
 
 0.953
SLM33234.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.942
SLM33235.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.942
gspD
GspD1.
 
  
 0.928
SLM33241.1
Pseudopilin, cryptic, general secretion pathway (modular protein).
 
 0.879
pilD
PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.866
gspG
Pseudopilin, cryptic, general secretion pathway; Function of strongly homologous gene; transporter.
 
 0.850
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.