STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ52544.1Methyltransferase, FkbM family; PFAM: Methyltransferase FkbM domain; TIGRFAM: methyltransferase, FkbM family. (194 aa)    
Predicted Functional Partners:
APZ52545.1
Hypothetical protein.
       0.517
APZ52546.1
Sortase-like acyltransferase; PFAM: Acetyltransferase (GNAT) domain.
       0.517
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.478
APZ54501.1
Apolipoprotein D and lipocalin family protein.
  
     0.469
APZ54493.1
Methyltransferase, FkbM family; PFAM: Methyltransferase FkbM domain; TIGRFAM: methyltransferase, FkbM family.
  
     0.462
APZ52749.1
Hint domain-containing protein; PFAM: Hint domain.
  
     0.434
APZ53936.1
Menaquinone-dependent protoporphyrinogen oxidase; PFAM: Flavodoxin domain.
  
     0.434
APZ54999.1
TPR repeat protein.
  
     0.425
APZ52547.1
PFAM: Acetyltransferase (GNAT) family.
       0.422
Your Current Organism:
Pelagibaca abyssi
NCBI taxonomy Id: 1250539
Other names: CGMCC 1.12376, LMG 27363, LMG:27363, P. abyssi, Pelagibaca sp. JLT2014, strain JLT2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.