STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW74216.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)    
Predicted Functional Partners:
AOW75368.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
AOW74215.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.579
AOW75369.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.465
AOW74217.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S14 family.
       0.465
AOW74213.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
AOW74214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
AOW74218.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
AOW74219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.409
AOW74220.1
Head-tail adaptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.409
AOW74221.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.409
Your Current Organism:
Pediococcus acidilactici
NCBI taxonomy Id: 1254
Other names: BCRC 80335 [[Pediococcus lolii]], CCUG 32235, CIP 103408, DSM 19927 [[Pediococcus lolii]], DSM 20284, JCM 15055 [[Pediococcus lolii]], LMG 11384, LMG:11384, Lactobacillus sp. Lact11, NCFB 2767, NCIMB 12174, P. acidilactici, Pediococcus lindneri, Pediococcus lolii, Pediococcus lolii Doi et al. 2009, strain B213c, strain Back S213C, strain NGRI 0510Q [[Pediococcus lolii]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.