STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemEUroporphyrinogen decarboxylase. (270 aa)    
Predicted Functional Partners:
OCA06778.1
Coproporphyrinogen III oxidase family protein.
  
 0.999
wTpre_684
uroporphyrinogen-III synthase HemD family protein.
 
 
 0.999
hemC
Porphobilinogen deaminase.
 0.988
hemH
Ferrochelatase.
 
  
 0.988
gidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA.
     
 0.791
hemA
5-aminolevulinic acid synthase.
     
 0.764
wTpre_716
Delta-aminolevulinic acid dehydratase family protein.
 
 
 0.725
polA
DNA polymerase I.
     
 0.637
cyoE
Protoheme IX farnesyltransferase.
  
   
 0.538
guaA
GMP synthase (glutamine-hydrolyzing), N-terminal domain.
     
 0.538
Your Current Organism:
Wolbachia endosymbiont of Trichogramma
NCBI taxonomy Id: 125593
Other names: W. endosymbiont of Trichogramma pretiosum, Wolbachia endosymbiont of Trichogramma pretiosum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.