STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60047.1Hypothetical protein; COG2405 Predicted nucleic acid-binding protein, contains PIN domain. (151 aa)    
Predicted Functional Partners:
AHM62817.1
COG2886 Uncharacterized small protein.
 
     0.784
AHM60046.1
COG2886 Uncharacterized small protein.
       0.783
AHM60050.1
Hypothetical protein.
  
     0.734
AHM62822.1
Hypothetical protein.
  
     0.726
AHM62659.1
Hypothetical protein.
  
     0.722
AHM61237.1
Hypothetical protein.
  
     0.704
AHM62821.1
Hypothetical protein.
  
     0.681
AHM59091.1
Hypothetical protein.
  
     0.637
AHM59090.1
COG4634 Uncharacterized protein conserved in bacteria.
  
     0.626
AHM59896.1
COG3744 Uncharacterized protein conserved in bacteria.
  
     0.533
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.