STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62581.1Tetratricopeptide TPR_1 repeat-containing protein; COG0457 FOG: TPR repeat. (558 aa)    
Predicted Functional Partners:
AHM62580.1
Hypothetical protein.
 
  
 0.854
AHM62579.1
Peptidase m23; COG4942 Membrane-bound metallopeptidase.
 
     0.742
AHM61065.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
 
 
 0.659
AHM62582.1
Nucleotidyl transferase; COG1209 dTDP-glucose pyrophosphorylase.
       0.620
AHM60939.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
 
 0.599
AHM63257.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
   
 
 0.582
AHM60228.1
Hypothetical protein.
  
     0.579
AHM61018.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
     0.562
AHM62196.1
COG0457 FOG: TPR repeat.
 
 
0.562
AHM61400.1
Hypothetical protein.
 
   
 0.553
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.