STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62666.1Hypothetical protein; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (650 aa)    
Predicted Functional Partners:
AHM63322.1
COG0726 Predicted xylanase/chitin deacetylase.
     0.903
AHM62667.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
 
     0.772
AHM60882.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
 
     0.763
AHM63131.1
Hypothetical protein.
 
 
   0.751
AHM62668.1
Glycoside hydrolase.
 
     0.719
AHM63126.1
COG3661 Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
    0.707
AHM63124.1
Family 10 endo-beta-xylanase; COG3693 Beta-1,4-xylanase.
 
     0.695
AHM61589.1
Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.635
AHM62615.1
Xylan 1,4-beta-xylosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.588
AHM60893.1
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
     0.547
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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