STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_095270Thioredoxin-like_fold domain-containing protein. (212 aa)    
Predicted Functional Partners:
ACA1_248230
Ribonuclease P/MRP 30 subunit.
    
 0.893
ACA1_201630
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 0.856
ACA1_276860
Ribonuclease, putative.
    
 0.848
ACA1_009160
Uncharacterized protein.
    
 0.780
ACA1_223050
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.650
ACA1_171240
Ribosomal protein L7Ae protein.
   
 0.650
ACA1_365780
Ribosomal protein S4, putative; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.625
ACA1_267040
Nin one binding (NOB1) Zn-ribbon family protein.
     
 0.625
ACA1_291360
Ribosomal protein S11, putative.
   
 
  0.625
ACA1_178320
40S ribosomal protein S9.
   
 
  0.615
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.