STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_349780HIT-type domain-containing protein. (224 aa)    
Predicted Functional Partners:
ACA1_194930
Matrix attachment region binding protein.
   
 
 0.848
ACA1_400220
Lysophospholipase.
    
   0.675
ACA1_093610
Phospholipase/carboxylesterase.
    
   0.675
ACA1_189820
Protein bcp1, putative.
   
  
 0.633
ACA1_076980
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.562
ACA1_278930
RNA recognition motif domain containing protein.
   
  
 0.532
ACA1_058140
Sarp-3, putative.
   
  
 0.517
ACA1_182810
RNA helicase.
   
 
 0.485
ACA1_182820
Uncharacterized protein.
   
 
 0.485
ACA1_095100
UTP23, small subunit (SSU) processome component family protein.
   
  
 0.455
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.