STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_061640Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
ACA1_352510
TalinB, putative.
    
 0.628
ACA1_025520
Talin, putative.
    
 0.628
ACA1_377410
Uncharacterized protein.
   
 0.537
ACA1_232820
Uncharacterized protein.
   
 0.537
ACA1_287840
RFX-type winged-helix domain-containing protein.
   
 0.523
ACA1_073470
SH3 domain containing protein.
    
 0.504
ACA1_326770
SH3 domain containing protein.
   
 
 0.453
ACA1_147710
FGGAP repeat domain containing protein.
    
 0.451
ACA1_148480
I/LWEQ domain containing protein.
    
 0.408
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.