STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_16250031.5 kDa midgut protein. (152 aa)    
Predicted Functional Partners:
ACA1_368030
Brix domain containing protein.
   
 
 0.579
ACA1_378220
Ribosomal L18p/L5e family.
    
 
 0.473
ACA1_204570
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.473
ACA1_138320
Brix domain containing protein.
   
    0.442
ACA1_065980
Periodic tryptophan protein 2, putative.
   
    0.430
ACA1_061660
Ribosomal L5P family Cterminus, putative; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.426
ACA1_296930
Cirhin isoform 3, putative.
   
    0.402
ACA1_037110
Bms1-type G domain-containing protein.
   
  
 0.401
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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