STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_155480Ubiquitin conjugating enzyme, putative. (157 aa)    
Predicted Functional Partners:
ACA1_318550
HECTdomain (Ubiquitin-transferase) domain containing protein.
   
 0.969
ACA1_152950
Ubiquitin-conjugating enzyme family protein.
   
 0.857
ACA1_087660
Zinc finger, C3HC4 type (RING finger) domain containing protein.
    
 0.782
ACA1_064860
Ubiquitin thioesterase otubainlike, putative.
    
 0.771
ACA1_376610
DEAD/DEAH box helicase domain containing protein.
    
 0.763
ACA1_368020
RINGbox protein 1, putative.
    
 0.751
ACA1_379360
Bbox zinc finger domain containing protein.
   
 
 0.730
ACA1_065840
Peroxisomal D3,D2enoyl-CoA isomerase isoform 1 variant, putative.
   
 0.688
ACA1_071890
FHA domain containing protein.
   
 0.688
ACA1_073040
WD domain, G-beta repeat-containing protein.
    
 0.683
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.