STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_184090Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
ACA1_384660
Retinoblastoma binding protein 4 variant isoform 1, putative.
   
 0.802
ACA1_265870
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.793
ACA1_376610
DEAD/DEAH box helicase domain containing protein.
   
 0.760
ACA1_325190
CCAATbox binding transcription factor subunit HAP3-related, putative.
    
 0.749
ACA1_139000
Histone H2A; Belongs to the histone H2A family.
   
 0.647
ACA1_364730
Histone H2A; Belongs to the histone H2A family.
   
 0.618
ACA1_262520
Histone H2A; Belongs to the histone H2A family.
   
 0.618
ACA1_141890
PH domain containing protein.
   
 0.618
ACA1_134870
PHDfinger domain containing protein.
    
 0.606
ACA1_198330
Iglike, group 2, putative.
   
 
 0.606
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.