STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_149320DUF4209 domain-containing protein. (820 aa)    
Predicted Functional Partners:
ACA1_292900
Tcomplex protein 1, epsilon subunit.
   
 0.947
ACA1_090030
Tcomplex protein 1, theta subunit.
   
 0.940
ACA1_290270
T-complex protein 1 subunit delta.
   
 0.936
ACA1_059740
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 0.871
ACA1_146250
Uncharacterized protein.
   
 0.871
ACA1_396130
Prefoldin, alpha subunit.
   
 0.641
ACA1_283510
Indole3-glycerol phosphate synthase.
   
 
 0.612
ACA1_049210
Phosducin subfamily protein.
   
 
 0.602
ACA1_268910
Elongation factor 1-gamma family protein.
   
 
 0.590
ACA1_383490
ATPdependent protease La, putative; Belongs to the peptidase S16 family.
  
 0.574
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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