STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_360170Ras subfamily protein. (194 aa)    
Predicted Functional Partners:
ACA1_058790
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.725
ACA1_064400
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
     
 0.647
ACA1_267290
Uncharacterized protein.
   
 
  0.622
ACA1_366460
Dynactin subunit 6, putative.
     
 0.617
ACA1_087350
Protein prenyltransferase, putative.
    
 0.593
ACA1_285220
Protein prenyltransferase alpha subunit repeat-containing protein.
    
 0.593
ACA1_364700
Ras family protein.
  
 
  0.587
ACA1_295980
Glycosyltransferase, group 2 domain containing protein.
     
 0.557
ACA1_301250
RAB36 member RAS oncogene family protein.
  
 
0.550
ACA1_139260
GTPbinding protein.
  
 
0.541
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.