STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_149240Peptidase, S8/S53 subfamily protein. (1259 aa)    
Predicted Functional Partners:
ACA1_142810
Signal peptidase I.
     
 0.611
ACA1_277590
Muramoyltetrapeptide carboxypeptidase.
      
 0.452
ACA1_390930
Peptidase family M3 protein.
   
  
 0.450
ACA1_128510
Chaperonin GroL, putative; Belongs to the chaperonin (HSP60) family.
  
 
 0.423
ACA1_377440
Uncharacterized protein.
   
 0.408
ACA1_036280
Actin-1, putative.
   
 
 0.405
ACA1_205660
Heat shock protein 82, putative.
   
 
 0.402
ACA1_007780
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.400
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.