STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_068720WD repeatcontaining protein. (457 aa)    
Predicted Functional Partners:
ACA1_250540
Tau-protein kinase.
   
 0.855
ACA1_376550
Cell division control protein 2b, putative; Belongs to the protein kinase superfamily.
   
 0.855
ACA1_149520
WD domain, Gbeta repeat-containing protein.
  
 0.811
ACA1_379860
Cdc20, putative.
  
 0.810
ACA1_184060
Cdc20, putative.
  
 0.805
ACA1_140940
WD domain, Gbeta repeat-containing protein.
  
 0.804
ACA1_217150
Protein kinase domain containing protein.
   
 0.793
ACA1_200020
Protein kinase domain containing protein.
   
 0.793
ACA1_240180
WD domain, Gbeta repeat-containing protein.
  
 0.789
ACA1_380220
WD domain, G-beta repeat-containing protein.
  
 0.786
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.