STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_272250Hemerythrin hhe cation binding subfamily protein. (187 aa)    
Predicted Functional Partners:
ACA1_157900
Cleavage and polyadenylation specific factor 3like, putative.
    
 0.482
ACA1_180820
HEAT repeat domain containing protein.
    
 0.454
ACA1_178760
Uncharacterized protein.
    
 0.436
ACA1_333360
Integrator complex subunit 3 isoform 1, putative.
    
 0.434
ACA1_219080
Uncharacterized protein.
    
 0.432
ACA1_323150
Cytochrome b5 domain containing protein.
    
 0.423
ACA1_191180
Integrator complex subunit 9, putative.
    
 0.419
ACA1_017430
Integrator complex subunit 9, putative.
    
 0.419
ACA1_234150
Integrator complex subunit 6, putative.
    
 0.416
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.