STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKZ62922.1Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)    
Predicted Functional Partners:
AKZ62928.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
AKZ62926.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.993
AKZ62927.1
phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
paaB
phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
AKZ65275.1
phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
AKZ61522.1
CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
AKZ62923.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
AKZ63331.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.946
AKZ62924.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.922
AKZ63290.1
Aromatic compound catabolic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.909
Your Current Organism:
Herbaspirillum hiltneri
NCBI taxonomy Id: 1262470
Other names: H. hiltneri N3, Herbaspirillum hiltneri N3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.