STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE28783.1Cof-like hydrolase; Product inferred by homology to UniProt. (265 aa)    
Predicted Functional Partners:
CDE29056.1
Cof-like hydrolase; Product inferred by homology to UniProt.
  
 
  0.822
CDE28396.1
Cof-like hydrolase; Product inferred by homology to UniProt.
  
 
  0.819
CDE28781.1
Cof-like hydrolase; Product inferred by homology to UniProt.
  
 
  0.793
CDE27855.1
Cof-like hydrolase; Product inferred by homology to UniProt.
  
 
  0.724
CDE28813.1
Cof-like hydrolase; Product inferred by homology to UniProt.
 
 
 
0.533
CDE28812.1
Cof-like hydrolase; Product inferred by homology to UniProt.
 
 
 
0.530
CDE28699.1
Riboflavin biosynthesis protein RibF; Product inferred by homology to UniProt; Belongs to the ribF family.
   
 0.523
CDE27516.1
hAD hydrolase family IIB; Product inferred by homology to UniProt.
  
 
  0.522
CDE28782.1
Lichenan-specific phosphotransferase enzyme IIA component; Product inferred by homology to UniProt.
  
    0.516
CDE28784.1
yhgE/Pip domain protein; Product inferred by homology to UniProt.
       0.497
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.