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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27080.11 4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (591 aa)    
Predicted Functional Partners:
CDE28967.1
4-alpha-glucanotransferase; Product inferred by homology to UniProt.
 
 
 0.989
glgA-2
Glycogen synthase 2; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.973
CDE29086.1
Phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.966
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 0.956
CDE29088.1
Pullulanase type I; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 13 family.
 
0.956
CDE27190.1
Alpha amylase catalytic domain protein; Product inferred by homology to UniProt.
 
 0.934
CDE28808.1
Glucose-1-phosphate adenylyltransferase GlgD subunit; Product inferred by homology to UniProt.
 
 
 0.926
glgA
Glycogen synthase 1; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.912
atpD
aTP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.911
CDE28144.1
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
 0.885
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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