STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD36869.1Two component transcriptional regulator winged helix family; Product inferred by homology to UniProt. (224 aa)    
Predicted Functional Partners:
CDD36868.1
Integral membrane sensor signal transduction histidine kinase; Product inferred by homology to UniProt.
 
 0.993
CDD37407.1
Signal transduction histidine kinase; Product inferred by homology to UniProt.
 0.984
CDD36755.1
Integral membrane sensor signal transduction histidine kinase; Product inferred by homology to UniProt.
 0.970
CDD36546.1
Histidine kinase A domain protein; Product inferred by homology to UniProt.
 
 0.925
CDD36714.1
Integral membrane sensor signal transduction histidine kinase; Product inferred by homology to UniProt.
 
 0.922
CDD36992.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 0.915
CDD36482.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 0.877
CDD37085.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
     
 0.803
CDD37411.1
Ferredoxin; Product inferred by homology to UniProt.
    
   0.685
CDD36543.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
   
 0.671
Your Current Organism:
Clostridium sp. CAG356
NCBI taxonomy Id: 1262800
Other names: C. sp. CAG:356, Clostridium sp. CAG:356
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