STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE90124.1Resolvase domain protein; Product inferred by homology to UniProt. (369 aa)    
Predicted Functional Partners:
CDE90123.1
Lin1231 protein; Product inferred by homology to UniProt.
     0.944
CDE90125.1
Mobilization protein; Product inferred by homology to UniProt.
 
    0.724
CDE90622.1
Resolvase domain protein; Product inferred by homology to UniProt.
  
     0.619
CDE89961.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.596
CDE90621.1
Recombinase; Product inferred by homology to UniProt.
  
     0.584
CDE90408.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
   
 0.520
CDE91277.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
     0.476
CDE90126.1
Unknown; No significant homology to UniProt.
       0.440
CDE90127.1
Unknown; No significant homology to UniProt.
       0.416
CDE90419.1
Antirestriction protein ArdA; Product inferred by homology to UniProt.
  
     0.414
Your Current Organism:
Clostridium sp. CAG389
NCBI taxonomy Id: 1262801
Other names: C. sp. CAG:389, Clostridium sp. CAG:389
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.