STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC81235.1Zinc ABC transporter zinc-binding lipoprotein; Product inferred by homology to UniProt; Belongs to the bacterial solute-binding protein 9 family. (316 aa)    
Predicted Functional Partners:
CDC79688.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
 0.997
CDC79690.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
 
 0.996
CDC81907.1
Phosphoribosylformylglycinamidine synthase; Product inferred by homology to UniProt.
    
 0.768
CDC79571.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.640
CDC82106.1
Iron (Metal) dependent repressor DtxR family; Product inferred by homology to UniProt.
  
 
 0.640
rpsZ
30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.591
rpmB
50S ribosomal protein L28; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.586
CDC82858.1
Glyceraldehyde-3-phosphate dehydrogenase type I; Product inferred by homology to UniProt; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.564
CDC81232.1
Ig domain protein group 2 domain protein; Product inferred by homology to UniProt.
       0.548
folD
Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
  0.518
Your Current Organism:
Clostridium sp. CAG964
NCBI taxonomy Id: 1262848
Other names: C. sp. CAG:964, Clostridium sp. CAG:964
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