STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF14713.1Small acid-soluble spore protein; Product inferred by homology to UniProt. (65 aa)    
Predicted Functional Partners:
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.746
CDF14047.1
Putative stage IV sporulation protein YqfD; Product inferred by homology to UniProt.
 
     0.652
CDF13689.1
Stage III sporulation protein AC; Product inferred by homology to UniProt.
  
     0.636
CDF14580.1
Stage V sporulation protein AD (SpoVAD); Product inferred by homology to UniProt.
  
    0.606
CDF13309.1
Stage V sporulation protein AC; Product inferred by homology to UniProt.
  
  
 0.586
CDF12827.1
Stage II sporulation protein P; Product inferred by homology to UniProt.
  
     0.586
CDF14618.1
Stage V sporulation protein AE; Product inferred by homology to UniProt.
  
     0.578
CDF12624.1
aTP-dependent Clp protease proteolytic subunit; Product inferred by homology to UniProt.
  
     0.545
CDF14888.1
Sporulation transcriptional regulator SpoIIID; Product inferred by homology to UniProt.
  
    0.523
CDF14467.1
Transcriptional regulator AbrB family; Product inferred by homology to UniProt.
  
     0.517
Your Current Organism:
Eubacterium sp. CAG581
NCBI taxonomy Id: 1262890
Other names: E. sp. CAG:581, Eubacterium sp. CAG:581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.