STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF08053.1Putative uncharacterized protein; Product inferred by homology to UniProt. (142 aa)    
Predicted Functional Partners:
CDF07260.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.863
CDF08203.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.831
CDF08726.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.812
CDF07741.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
    
  0.791
CDF08342.1
Multidomain signal transduction protein (GGDEF and EAL domains); Product inferred by homology to UniProt.
    
  0.789
CDF06164.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.787
CDF08262.1
lytTr DNA-binding domain; Product inferred by homology to UniProt.
   
 
 0.759
CDF07617.1
Metal dependent phosphohydrolase; Product inferred by homology to UniProt.
    
  0.720
CDF08036.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.704
sbcD
Putative uncharacterized protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
    
  0.704
Your Current Organism:
Firmicutes bacterium CAG95
NCBI taxonomy Id: 1262988
Other names: F. bacterium CAG:95, Firmicutes bacterium CAG:95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.