STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC69885.1Putative Na+ driven multidrug efflux pump; Product inferred by homology to UniProt. (444 aa)    
Predicted Functional Partners:
CDC73671.1
Glyceraldehyde 3-phosphate dehydrogenase; Product inferred by homology to UniProt; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.620
CDC75875.1
S1 RNA binding domain protein; Product inferred by homology to UniProt.
  
    0.592
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
     
 0.533
CDC71623.1
Uncharacterized protein; Product inferred by homology to UniProt.
   
    0.465
CDC72006.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
    0.465
CDC74408.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
    0.465
CDC69881.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the LysR transcriptional regulatory family.
     
 0.452
CDC69877.1
Mg chelatase-like protein; Product inferred by homology to UniProt.
       0.401
Your Current Organism:
Firmicutes bacterium CAG272
NCBI taxonomy Id: 1263015
Other names: F. bacterium CAG:272, Firmicutes bacterium CAG:272
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