STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00281.1CAP-Gly domain-containing protein. (1180 aa)    
Predicted Functional Partners:
LCOR_07809.1
Mitotic checkpoint protein bub3.
    
 0.796
LCOR_09626.1
Phosphatidylinositol kinase tor2; Belongs to the PI3/PI4-kinase family.
   
 0.792
LCOR_02408.1
Ras-associating domain-containing protein.
    
 0.761
LCOR_01752.1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.735
LCOR_05744.1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.735
LCOR_00944.1
Microtubule associated protein.
    
 
 0.723
LCOR_03047.1
Cytoplasmic dynein 1 heavy chain 1.
    
 0.720
LCOR_06963.1
Related to kel1-involved in cell fusion andmorphology.
    
 
 0.719
LCOR_04150.1
Ras gtpase activating protein.
   
 0.716
LCOR_06968.1
Dynactin subunit 2.
    
 
 0.705
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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