STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_00735.12-hydroxyglutarate dehydrogenase. (528 aa)    
Predicted Functional Partners:
LCOR_02487.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.791
LCOR_03074.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.791
LCOR_07297.1
Uncharacterized protein.
  
 
 0.791
LCOR_03110.1
Fumarate hydratase.
    
 0.732
LCOR_06506.1
Fumarate hydratase.
    
 0.732
LCOR_04485.1
Malate synthase; Belongs to the malate synthase family.
     
 0.729
LCOR_09589.1
Ankyrin repeat protein nuc-2.
    
 0.718
LCOR_03926.1
Glycerophosphodiesterase gde1.
    
 0.716
LCOR_06219.1
Glycerophosphocholine phosphodiesterase.
    
 0.716
LCOR_04730.1
Argininosuccinate lyase.
    
 0.703
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.