STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02021.1Rho guanyl nucleotide exchange factor. (1283 aa)    
Predicted Functional Partners:
LCOR_04938.1
Rho guanyl nucleotide exchange factor.
  
 
0.814
LCOR_05487.1
Dbl-like domain-containing protein.
  
 
0.814
LCOR_01842.1
Dbl domain-containing protein.
  
 
0.811
LCOR_03041.1
Glyoxal oxidase.
    
 0.792
LCOR_11200.1
Uncharacterized protein.
    
 0.792
LCOR_00336.1
Gtp-binding protein rho3.
    
 0.780
LCOR_05840.1
Rho gtpase rho1.
    
 0.780
LCOR_08052.1
Gtp-binding protein rhoa.
    
 0.780
LCOR_08087.1
Gtp-binding protein rho3.
    
 0.780
LCOR_11144.1
Rho gtpase rho1.
    
 0.780
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
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