STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCOR_02799.14-hydroxyphenylpyruvate dioxygenase. (393 aa)    
Predicted Functional Partners:
LCOR_09660.1
Homogentisate-dioxygenase.
  
 0.988
LCOR_03572.1
Propionyl-beta subunit.
  
 
 0.932
LCOR_06493.1
Carboxyl transferase.
  
 
 0.932
LCOR_06331.1
Propionyl-carboxylase.
  
 
 0.932
LCOR_10646.1
Tyrosine aminotransferase.
   
 
 0.925
LCOR_02618.1
Aspartate aminotransferase.
  
 
 0.895
LCOR_10049.1
Tryptophan synthase.
  
 
 0.867
LCOR_01322.1
Aspartate aminotransferase.
  
 
 0.866
LCOR_07106.1
Aspartate aminotransferase.
  
 
 0.866
LCOR_00519.1
Negative elongation factor d-like.
  
 
 0.862
Your Current Organism:
Lichtheimia corymbifera
NCBI taxonomy Id: 1263082
Other names: L. corymbifera JMRC:FSU:9682, Lichtheimia corymbifera CBS 429.75, Lichtheimia corymbifera FSU 9682, Lichtheimia corymbifera JMRC:FSU:9682
Server load: low (26%) [HD]