STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neuCN-acylglucosamine 2-epimerase. (376 aa)    
Predicted Functional Partners:
CCQ89759.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.996
rfbB
dTDP-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.923
CCQ89755.1
Putative oxidoreductase, GFO/Idh/MocA family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.901
pyrF
Putative acylneuraminate cytidylyltransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.831
epsN
Putative pyridoxal phosphate-dependent aminotransferase epsN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.825
CCQ89553.1
Oxidoreductase.
  
 
 0.824
CCQ89161.1
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.792
CCQ89753.1
Serine O-acetyltransferase.
 
 
 0.792
CCQ89789.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.792
CCQ89811.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.790
Your Current Organism:
Nitrospina gracilis
NCBI taxonomy Id: 1266370
Other names: N. gracilis 3/211, Nitrospina gracilis 3/211, Nitrospina gracilis str. 3/211, Nitrospina gracilis strain 3/211
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