STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHV95677.1Hypothetical protein; COG0388 Predicted amidohydrolase. (272 aa)    
Predicted Functional Partners:
AHV95678.1
HpcH/HpaI aldolase; COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.711
AHV95676.1
COG1802 Transcriptional regulators.
       0.699
aguA
COG2957 Peptidylarginine deiminase and related enzymes.
  
 0.580
AHV95679.1
ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
       0.556
AHV95675.1
Acetamidase; COG2421 Predicted acetamidase/formamidase.
     
 0.509
AHV95680.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.494
AHV95681.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.470
AHV97273.1
COG0477 Permeases of the major facilitator superfamily.
 
 
    0.428
AHV95674.1
COG4302 Ethanolamine ammonia-lyase, small subunit; Belongs to the EutC family.
       0.420
AHV95682.1
ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.420
Your Current Organism:
Paenibacillus sabinae
NCBI taxonomy Id: 1268072
Other names: P. sabinae T27, Paenibacillus sabinae T27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.