STRINGSTRING
SMAR000080-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000080-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000080-PAannotation not available (341 aa)    
Predicted Functional Partners:
SMAR009292-PA
annotation not available (397 aa)
     
 
  0.594
SMAR009058-PA
Spastin; ATP-dependent microtubule severing protein. Microtubule severing may promote reorganization of cellular microtubule arrays and the release of microtubules from the microtubule organizing center following nucleation; Belongs to the AAA ATPase family. Spastin subfamily (683 aa)
     
 
  0.543
SMAR008447-PA
annotation not available (2550 aa)
     
      0.452
SMAR012815-PA
annotation not available (560 aa)
     
 
  0.438
SMAR015269-PA
annotation not available (231 aa)
     
   
  0.416
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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