STRINGSTRING
SMAR000114-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000114-PA" - Histone H4 in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000114-PAHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)    
Predicted Functional Partners:
SMAR013626-PA
annotation not available (136 aa)
 
 
  0.976
SMAR000116-PA
annotation not available (136 aa)
 
 
  0.949
SMAR011987-PA
annotation not available (1097 aa)
       
  0.942
SMAR004402-PA
annotation not available (403 aa)
 
 
  0.913
SMAR009102-PA
annotation not available (1007 aa)
     
  0.899
SMAR006627-PA
annotation not available (413 aa)
     
  0.895
SMAR012624-PA
annotation not available (863 aa)
     
  0.895
SMAR014272-PA
annotation not available (199 aa)
     
  0.876
SMAR014515-PA
annotation not available (1429 aa)
     
  0.873
SMAR001202-PA
annotation not available (1432 aa)
       
  0.866
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
Server load: low (17%) [HD]