STRINGSTRING
SMAR000116-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000116-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000116-PAannotation not available (136 aa)    
Predicted Functional Partners:
SMAR013626-PA
annotation not available (136 aa)
       
0.967
SMAR010742-PA
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (145 aa)
 
 
  0.949
SMAR000114-PA
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
 
 
  0.949
SMAR009102-PA
annotation not available (1007 aa)
     
  0.933
SMAR004402-PA
annotation not available (403 aa)
 
 
  0.922
SMAR014189-PA
annotation not available (950 aa)
       
  0.919
SMAR007393-PA
annotation not available (867 aa)
       
  0.909
SMAR015271-PA
annotation not available (1322 aa)
     
  0.894
SMAR004454-PA
annotation not available (1220 aa)
       
  0.892
SMAR007148-PA
annotation not available (1092 aa)
     
  0.891
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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