STRINGSTRING
SMAR000122-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000122-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000122-PAannotation not available (1064 aa)    
Predicted Functional Partners:
SMAR011659-PA
annotation not available (212 aa)
         
  0.534
KATNB1
Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation (791 aa)
           
  0.515
SMAR011796-PA
annotation not available (1419 aa)
     
 
  0.462
SMAR002885-PA
annotation not available (234 aa)
           
  0.454
SMAR014270-PA
annotation not available (732 aa)
     
 
  0.451
SMAR002259-PA
annotation not available (524 aa)
     
   
  0.439
SMAR013991-PA
annotation not available (96 aa)
           
  0.435
SMAR013058-PA
annotation not available (241 aa)
           
  0.429
SMAR014297-PA
annotation not available (356 aa)
 
            0.426
SMAR012240-PA
annotation not available (835 aa)
           
  0.402
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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