STRINGSTRING
SMAR000123-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000123-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000123-PAannotation not available (997 aa)    
Predicted Functional Partners:
SMAR006459-PA
annotation not available (989 aa)
     
 
  0.639
SMAR011344-PA
annotation not available (436 aa)
     
   
  0.618
SMAR005108-PA
Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial; GTP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit (403 aa)
           
  0.519
SMAR015183-PA
annotation not available (321 aa)
           
  0.510
SMAR002699-PA
annotation not available (899 aa)
     
   
  0.430
SMAR008198-PA
annotation not available (1532 aa)
     
 
  0.427
SMAR010952-PA
annotation not available (1502 aa)
           
  0.405
SMAR010951-PA
annotation not available (669 aa)
           
  0.405
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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