STRINGSTRING
SMAR000142-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000142-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000142-PAannotation not available (909 aa)    
Predicted Functional Partners:
SMAR004591-PA
annotation not available (199 aa)
     
 
  0.837
SMAR013103-PA
annotation not available (931 aa)
     
 
  0.571
SMAR014611-PA
annotation not available (964 aa)
     
 
  0.571
SMAR014091-PA
annotation not available (288 aa)
     
 
  0.549
SMAR007941-PA
annotation not available (1488 aa)
     
 
  0.520
SMAR015297-PA
annotation not available (1010 aa)
     
   
  0.495
SMAR007245-PA
annotation not available (1049 aa)
     
   
  0.489
SMAR002769-PA
annotation not available (1017 aa)
     
 
  0.480
SMAR001403-PA
annotation not available (938 aa)
     
   
  0.475
SMAR006742-PA
annotation not available (4087 aa)
     
   
  0.443
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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