STRINGSTRING
SMAR000382-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000382-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000382-PAannotation not available (240 aa)    
Predicted Functional Partners:
SMAR002065-PA
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1178 aa)
     
  0.902
SMAR007707-PA
annotation not available (275 aa)
     
  0.900
SMAR007883-PA
annotation not available (116 aa)
     
  0.888
SMAR011585-PA
annotation not available (73 aa)
     
  0.886
SMAR000121-PA
annotation not available (210 aa)
     
  0.886
SMAR004510-PA
annotation not available (330 aa)
     
  0.883
SMAR006894-PA
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (103 aa)
     
  0.883
SMAR005212-PA
General transcription factor IIH subunit 4; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (407 aa)
     
  0.871
SMAR009998-PA
annotation not available (792 aa)
     
  0.868
SMAR015785-PA
annotation not available (73 aa)
     
  0.862
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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