STRINGSTRING
SMAR000462-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000462-PA" - Hedgehog protein in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000462-PAHedgehog protein; Intercellular signal essential for a variety of patterning events during development (397 aa)    
Predicted Functional Partners:
SMAR004227-PA
annotation not available (892 aa)
       
  0.913
SMAR015774-PA
annotation not available (1197 aa)
     
  0.895
SMAR014798-PA
annotation not available (130 aa)
     
  0.869
SMAR001255-PA
annotation not available (1187 aa)
     
  0.869
SMAR001254-PA
annotation not available (168 aa)
     
  0.869
SMAR003047-PA
annotation not available (528 aa)
     
  0.843
SMAR013036-PA
annotation not available (1879 aa)
       
  0.827
SMAR012402-PA
annotation not available (1854 aa)
       
  0.827
SMAR012839-PA
annotation not available (252 aa)
       
  0.801
SMAR013758-PA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate (299 aa)
     
  0.762
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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