STRINGSTRING
SMAR000496-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000496-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000496-PAannotation not available (394 aa)    
Predicted Functional Partners:
SMAR002943-PA
annotation not available (460 aa)
       
  0.985
SMAR015137-PA
annotation not available (448 aa)
     
  0.948
SMAR007826-PA
annotation not available (964 aa)
     
  0.948
SMAR012345-PA
annotation not available (2135 aa)
     
 
  0.926
SMAR014345-PA
annotation not available (419 aa)
     
 
  0.917
SMAR014888-PA
Autophagy protein 5; Involved in autophagic vesicle formation (265 aa)
     
 
  0.910
SMAR010129-PA
annotation not available (1404 aa)
     
  0.909
SMAR003612-PA
annotation not available (528 aa)
     
  0.909
SMAR004010-PA
annotation not available (1359 aa)
         
  0.904
SMAR012482-PA
annotation not available (949 aa)
     
 
  0.884
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
Server load: low (11%) [HD]