STRINGSTRING
SMAR000550-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000550-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000550-PAannotation not available (247 aa)    
Predicted Functional Partners:
SMAR002918-PA
annotation not available (418 aa)
           
  0.501
SMAR013344-PA
annotation not available (157 aa)
           
  0.491
SMAR004045-PA
annotation not available (818 aa)
     
   
  0.467
SMAR003817-PA
annotation not available (885 aa)
     
   
  0.467
SMAR015132-PA
annotation not available (530 aa)
     
   
  0.432
SMAR001107-PA
annotation not available (680 aa)
           
  0.429
SMAR014019-PA
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (95 aa)
           
  0.428
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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