STRINGSTRING
SMAR000581-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000581-PA" - Uncharacterized protein in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000581-PAUncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (1001 aa)    
Predicted Functional Partners:
SMAR002800-PA
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (920 aa)
   
0.980
SMAR003275-PA
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (1288 aa)
   
0.963
SMAR013089-PA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (261 aa)
     
  0.962
SMAR010411-PA
annotation not available (658 aa)
   
  0.956
SMAR010795-PA
annotation not available (1451 aa)
   
  0.949
SMAR009313-PA
annotation not available (2140 aa)
     
 
  0.944
SMAR004056-PA
annotation not available (1434 aa)
     
  0.940
SMAR004709-PA
annotation not available (1286 aa)
     
  0.935
SMAR013039-PA
annotation not available (997 aa)
   
  0.929
Fen1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (375 aa)
   
  0.908
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
Server load: low (17%) [HD]