STRINGSTRING
SMAR000584-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000584-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000584-PAannotation not available (521 aa)    
Predicted Functional Partners:
SMAR004740-PA
annotation not available (980 aa)
     
   
  0.788
SMAR009266-PA
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (182 aa)
           
  0.771
SMAR003972-PA
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (862 aa)
     
   
  0.767
SMAR014193-PA
annotation not available (165 aa)
     
   
  0.761
SMAR009054-PA
annotation not available (458 aa)
       
 
  0.728
SMAR011306-PA
annotation not available (315 aa)
           
  0.671
SMAR002533-PA
annotation not available (959 aa)
     
   
  0.658
SMAR005470-PA
annotation not available (1013 aa)
           
  0.654
SMAR008301-PA
annotation not available (1156 aa)
     
   
  0.650
SMAR011630-PA
annotation not available (522 aa)
     
   
  0.650
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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