STRINGSTRING
SMAR000601-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000601-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000601-PAannotation not available (614 aa)    
Predicted Functional Partners:
SMAR006148-PA
annotation not available (1637 aa)
     
  0.919
SMAR014675-PA
annotation not available (1215 aa)
     
  0.901
SMAR002682-PA
annotation not available (3881 aa)
     
  0.883
SMAR007590-PA
annotation not available (384 aa)
       
  0.882
SMAR006468-PA
annotation not available (175 aa)
     
  0.873
SMAR009651-PA
annotation not available (424 aa)
     
  0.855
SMAR007791-PA
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1652 aa)
     
  0.855
SMAR006460-PA
annotation not available (321 aa)
     
  0.848
SMAR011022-PA
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (951 aa)
     
  0.836
SMAR009835-PA
annotation not available (1053 aa)
     
  0.833
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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