STRINGSTRING
SMAR000611-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000611-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000611-PAannotation not available (358 aa)    
Predicted Functional Partners:
SMAR002512-PA
annotation not available (420 aa)
     
  0.794
SMAR011078-PA
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family (217 aa)
   
 
  0.688
SMAR005831-PA
annotation not available (329 aa)
         
  0.686
SMAR007017-PA
annotation not available (785 aa)
     
 
  0.673
SMAR014962-PA
annotation not available (418 aa)
   
 
  0.635
SMAR003017-PA
annotation not available (1640 aa)
   
   
  0.619
SMAR007213-PA
annotation not available (801 aa)
   
 
  0.601
SMAR015614-PA
annotation not available (347 aa)
   
   
  0.593
SMAR014431-PA
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (777 aa)
     
   
  0.587
SMAR009554-PA
annotation not available (427 aa)
   
 
  0.581
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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