STRINGSTRING
SMAR000644-PA protein (Strigamia maritima) - STRING interaction network
"SMAR000644-PA" - annotation not available in Strigamia maritima
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAR000644-PAannotation not available (487 aa)    
Predicted Functional Partners:
SMAR013374-PA
annotation not available (864 aa)
     
  0.982
SMAR009059-PA
annotation not available (573 aa)
     
  0.979
SMAR009972-PA
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1149 aa)
     
  0.966
SMAR008703-PA
annotation not available (209 aa)
       
  0.963
SMAR007316-PA
annotation not available (451 aa)
     
  0.944
SMAR001856-PA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1702 aa)
     
  0.941
SMAR012633-PA
annotation not available (203 aa)
     
  0.918
SMAR008040-PA
annotation not available (245 aa)
     
  0.918
SMAR002221-PA
annotation not available (200 aa)
     
  0.918
SMAR002219-PA
annotation not available (301 aa)
     
  0.918
Your Current Organism:
Strigamia maritima
NCBI taxonomy Id: 126957
Other names: S. maritima, Strigamia maritima
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